Transcript: ENST00000471454.1 STXBP5L-002

Description

syntaxin binding protein 5-like [Source:HGNC Symbol;Acc:30757]

Gene Synonyms

KIAA1006, LLGL4

Location

Chromosome 3: 120,627,052-121,138,130 forward strand.

About this transcript

This transcript has 27 exons, is annotated with 38 domains and features, is associated with 268529 variant alleles and maps to 571 oligo probes.

Gene

This transcript is a product of gene ENSG00000145087.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000273666.6	STXBP5L-001	9496	1186aa	ENSP00000273666.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43137	C9JUZ7 Q9Y2K9	NM_014980.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000471454.1	STXBP5L-002	3813	1162aa	ENSP00000420019.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JUZ7 E9PFI2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000471262.1	STXBP5L-005	3396	1129aa	ENSP00000420167.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JQS3 C9JUZ7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000492541.1	STXBP5L-006	3114	1026aa	ENSP00000420666.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JCY1 C9JUZ7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000472879.1	STXBP5L-007	3067	1002aa	ENSP00000419627.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JUZ7 C9K0E4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000497029.1	STXBP5L-004	3036	1000aa	ENSP00000420287.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JPK3 C9JUZ7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000495504.1	STXBP5L-008	479	127aa	ENSP00000419404.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JUZ7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000461772.1	STXBP5L-003	2321	74aa	ENSP00000420642.1	Nonsense mediated decay		Q9Y2K9	-	-

Summary

Statistics

Exons: 27, Coding exons: 26, Transcript length: 3,813 bps, Translation length: 1,162 residues

Version

ENST00000471454.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000355284 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000471454.1 STXBP5L-002

Summary