Transcript: ENST00000483224.1 SLC25A26-004

Description

solute carrier family 25 (S-adenosylmethionine carrier), member 26 [Source:HGNC Symbol;Acc:20661]

Gene Synonyms

SAMC

Location

Chromosome 3: 66,293,627-66,429,351 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 6 domains and features, is associated with 67979 variant alleles and maps to 570 oligo probes.

Gene

This transcript is a product of gene ENSG00000144741.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000354883.6	SLC25A26-001	2673	274aa	ENSP00000346955.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2905	F8WAB8	NM_173471.3_dupl9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000536651.1	SLC25A26-201	3869	21aa	ENSP00000442353.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5HCH6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000413054.1	SLC25A26-002	1096	210aa	ENSP00000415304.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000336733.6	SLC25A26-006	1023	186aa	ENSP00000336801.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54604	Q70HW3	NM_001164796.1_dupl9	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000464350.2	SLC25A26-003	3879	86aa	ENSP00000432574.2	Nonsense mediated decay		-	-	-
ENST00000483224.1	SLC25A26-004	1840	91aa	ENSP00000437217.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000484768.1	SLC25A26-005	375	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 4, Transcript length: 1,840 bps, Translation length: 91 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000483224.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000313897 (version 3)

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Transcript: ENST00000483224.1 SLC25A26-004

Summary