Transcript: ENST00000367821.3 TBX19-001

Description

T-box 19 [Source:HGNC Symbol;Acc:11596]

Gene Synonyms

TBS19, TPIT, dJ747L4.1, dj747L4.1

Location

About this transcript

This transcript has 8 exons, is annotated with 23 domains and features, is associated with 14164 variant alleles and maps to 408 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000367821.3	TBX19-001	2822	448aa	ENSP00000356795.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1272	O60806	NM_005149.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000431969.1	TBX19-004	2377	318aa	ENSP00000397540.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KRD9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000441464.1	TBX19-003	1757	281aa	ENSP00000390731.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000465440.1	TBX19-002	2578	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 2,822 bps, Translation length: 448 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O60806

CCDS

This transcript is a member of the Human CCDS set: CCDS1272

Version

ENST00000367821.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000083825 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.