Transcript: ENST00000369237.1 GJA5-001

Description

gap junction protein, alpha 5, 40kDa [Source:HGNC Symbol;Acc:4279]

Gene Synonyms

ATFB11, CX40

Location

About this transcript

This transcript has 2 exons, is annotated with 26 domains and features, is associated with 1765 variant alleles and maps to 388 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000271348.2	GJA5-201	3177	358aa	ENSP00000271348.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS929	P36382	NM_005266.6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000369237.1	GJA5-001	2153	358aa	ENSP00000358240.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS929	P36382	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000430508.1	GJA5-002	891	251aa	ENSP00000407645.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P36382	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 2,153 bps, Translation length: 358 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P36382

CCDS

This transcript is a member of the Human CCDS set: CCDS929

Version

ENST00000369237.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000039422 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.