Transcript: ENST00000374133.3 GPN2-002

Description

GPN-loop GTPase 2 [Source:HGNC Symbol;Acc:25513]

Gene Synonyms

ATPBD1B, FLJ10349

Location

About this transcript

This transcript has 4 exons, is annotated with 3 domains and features, is associated with 3210 variant alleles and maps to 235 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000374135.4	GPN2-001	4678	310aa	ENSP00000363250.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS289	Q9H9Y4	NM_018066.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000431781.2	GPN2-003	739	112aa	ENSP00000408257.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5JYG4	-	-
ENST00000374133.3	GPN2-002	715	131aa	ENSP00000363248.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5JYG3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000461282.1	GPN2-004	136	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477418.2	GPN2-005	749	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 715 bps, Translation length: 131 residues

Version

ENST00000374133.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000012176 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.