Transcript: ENST00000374550.3 RPL11-001

Description

ribosomal protein L11 [Source:HGNC Symbol;Acc:10301]

Gene Synonyms

DBA7, GIG34, L11

Location

About this transcript

This transcript has 6 exons, is annotated with 7 domains and features, is associated with 2657 variant alleles and maps to 378 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000374550.3	RPL11-001	634	178aa	ENSP00000363676.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS238	P62913 Q5VVC9 Q5VVD0	NM_001199802.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000443624.1	RPL11-004	994	131aa	ENSP00000390839.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5VVC9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000458455.1	RPL11-005	721	174aa	ENSP00000398888.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5VVC8 Q5VVC9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000482370.1	RPL11-003	879	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467075.1	RPL11-002	377	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 634 bps, Translation length: 178 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P62913

CCDS

This transcript is a member of the Human CCDS set: CCDS238

Version

ENST00000374550.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000008168 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.