Transcript: ENST00000590772.1 hsa-mir-1199.1-003

Description

hsa-mir-1199 [Source:miRBase;Acc:MI0020340]

Gene Synonyms

hsa-mir-1199

Location

About this transcript

This transcript has 3 exons, is annotated with 4 domains and features, is associated with 784 variant alleles and maps to 177 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq	Flags
ENST00000269720.2	hsa-mir-1199.1-201	1424	361aa	ENSP00000269720.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	K7EJG0 Q96FF7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000587086.1	hsa-mir-1199.1-001	1300	219aa	ENSP00000465157.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	K7EJG0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000590772.1	hsa-mir-1199.1-003	708	150aa	ENSP00000466176.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	K7ELQ6	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000591982.1	hsa-mir-1199.1-002	2187	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 708 bps, Translation length: 150 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000590772.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000458553 (version 1)