Description
SMAD family member 4 [Source:HGNC Symbol;Acc:6770]
Gene Synonyms
DPC4, JIP, MADH4, MYHRS
Location
Chromosome 18: 48,571,329-48,575,168 forward strand.
About this transcript
This transcript has 3 exons, is annotated with 9 domains and features, is associated with 2862 variant alleles and maps to 87 oligo probes.
Gene
This transcript is a product of gene ENSG00000141646.9 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000342988.3 | SMAD4-201 | 8769 | 552aa | ENSP00000341551.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS11950 | K7EIJ2 K7EL15 K7EL18 K7ENG1 K7ENG8 Q13485 Q9BYG6 | NM_005359.5 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000398417.2 | SMAD4-001 | 8495 | 552aa | ENSP00000381452.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS11950 | K7EIJ2 K7EL15 K7EL18 K7ENG1 K7ENG8 Q13485 Q9BYG6 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000588745.1 | SMAD4-004 | 1371 | 456aa | ENSP00000464901.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EIJ2 K7EIU8 K7EL15 K7EL18 K7ENG1 K7ENG8 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000452201.2 | SMAD4-202 | 1207 | 177aa | ENSP00000409551.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EIJ2 K7EL15 K7EL18 K7ENG1 K7ENG8 L7N2F7 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000591914.1 | SMAD4-008 | 992 | 151aa | ENSP00000466941.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EIJ2 K7EL15 K7EL18 K7ENG1 K7ENG8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000588860.1 | SMAD4-016 | 779 | 126aa | ENSP00000465878.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EL15 K7EL18 K7ENG1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000589941.1 | SMAD4-010 | 582 | 120aa | ENSP00000465874.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EL15 K7ENG1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000589076.1 | SMAD4-006 | 576 | 90aa | ENSP00000466934.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7ENG1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000593223.1 | SMAD4-013 | 568 | 82aa | ENSP00000466118.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7ELK2 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000590061.1 | SMAD4-007 | 544 | 140aa | ENSP00000464772.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EIJ2 K7EL15 K7EL18 K7ENG1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000592186.1 | SMAD4-005 | 1306 | 320aa | ENSP00000468611.1 | Nonsense mediated decay | K7EIJ2 K7EL15 K7EL18 K7ENG1 K7ENG8 K7ES96 | - | - | |
| ENST00000586253.1 | SMAD4-014 | 784 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000592911.1 | SMAD4-009 | 475 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000591126.1 | SMAD4-002 | 4970 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000589706.1 | SMAD4-011 | 563 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000590499.1 | SMAD4-012 | 545 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000585448.1 | SMAD4-015 | 459 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |