Description
coiled-coil domain containing 40 [Source:HGNC Symbol;Acc:26090]
Gene Synonyms
CILD15, FAP172, FLJ20753, FLJ32021, KIAA1640
Location
Chromosome 17: 78,061,313-78,069,136 forward strand.
About this transcript
This transcript has 4 exons, is associated with 4410 variant alleles and maps to 82 oligo probes.
Gene
This transcript is a product of gene ENSG00000141519.10 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000397545.4 | CCDC40-001 | 4294 | 1142aa | ENSP00000380679.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS42395 | I3L292 I3L2X6 Q4G0X9 | NM_017950.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000374877.3 | CCDC40-201 | 3120 | 1030aa | ENSP00000364011.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58604 | I3L292 I3L2X6 J3QSY2 | NM_001243342.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000374876.4 | CCDC40-003 | 2010 | 478aa | ENSP00000364010.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3L292 I3L2X6 Q4G0X9 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000269318.5 | CCDC40-002 | 1970 | 579aa | ENSP00000269318.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3L292 I3L2X6 Q4G0X9 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000571028.1 | CCDC40-012 | 593 | 83aa | ENSP00000461034.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000574099.1 | CCDC40-007 | 537 | 126aa | ENSP00000460002.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3L292 I3L2X6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000576033.1 | CCDC40-009 | 466 | 99aa | ENSP00000459489.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3L292 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000573474.1 | CCDC40-011 | 554 | 85aa | ENSP00000460432.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000573903.1 | CCDC40-014 | 561 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000572270.1 | CCDC40-008 | 460 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000572253.1 | CCDC40-005 | 3962 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000574799.1 | CCDC40-004 | 3795 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000572083.1 | CCDC40-010 | 816 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000576241.1 | CCDC40-015 | 714 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000575431.1 | CCDC40-013 | 551 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000574933.1 | CCDC40-016 | 326 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |