Transcript: ENST00000590225.1 ASXL3-012

Description

additional sex combs like 3 (Drosophila) [Source:HGNC Symbol;Acc:29357]

Gene Synonyms

BRPS, KIAA1713

Location

Chromosome 18: 31,185,572-31,226,313 forward strand.

About this transcript

This transcript has 5 exons, is associated with 16810 variant alleles and maps to 79 oligo probes.

Gene

This transcript is a product of gene ENSG00000141431.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000269197.5	ASXL3-002	11344	2248aa	ENSP00000269197.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45847	K7EQY1 Q9C0F0	NM_030632.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000586327.1	ASXL3-008	544	148aa	ENSP00000466244.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ELW2 K7EQ33	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000590189.1	ASXL3-004	538	179aa	ENSP00000468024.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EQY1	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000586596.1	ASXL3-015	523	174aa	ENSP00000465634.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000592288.1	ASXL3-001	3811	318aa	ENSP00000465053.1	Nonsense mediated decay		K7EJ76	-	-
ENST00000592541.1	ASXL3-005	752	58aa	ENSP00000466655.1	Nonsense mediated decay		K7EIX5	-	-
ENST00000585426.1	ASXL3-010	653	34aa	ENSP00000467648.1	Nonsense mediated decay		K7EQ33	-	-
ENST00000593195.1	ASXL3-003	594	61aa	ENSP00000466073.1	Nonsense mediated decay		K7ELD7 K7ELG8	-	-
ENST00000588741.1	ASXL3-011	573	34aa	ENSP00000466030.1	Nonsense mediated decay		K7ELD7	-	-
ENST00000588038.1	ASXL3-009	572	19aa	ENSP00000468264.1	Nonsense mediated decay		-	-	-
ENST00000590225.1	ASXL3-012	546	58aa	ENSP00000468533.1	Nonsense mediated decay		K7EIX5	-	-
ENST00000590973.1	ASXL3-014	540	58aa	ENSP00000464931.1	Nonsense mediated decay		K7EIX5	-	-
ENST00000593235.1	ASXL3-013	493	34aa	ENSP00000467907.1	Nonsense mediated decay		K7ELD7	-	-
ENST00000592349.1	ASXL3-006	558	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000586948.1	ASXL3-007	468	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 2, Transcript length: 546 bps, Translation length: 58 residues

Version

ENST00000590225.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000441874 (version 2)

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Transcript: ENST00000590225.1 ASXL3-012

Summary