Transcript: ENST00000393038.2 PTRH2-001

Description

peptidyl-tRNA hydrolase 2 [Source:HGNC Symbol;Acc:24265]

Gene Synonyms

BIT1, CGI-147, PTH2

Location

Chromosome 17: 57,774,667-57,784,959 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 8 domains and features, is associated with 4255 variant alleles and maps to 223 oligo probes.

Gene

This transcript is a product of gene ENSG00000141378.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000470557.2	PTRH2-003	4114	179aa	ENSP00000464327.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11618	Q9Y3E5	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409433.2	PTRH2-002	2246	180aa	ENSP00000387180.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KQ48	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000537860.1	PTRH2-201	2049	179aa	ENSP00000437690.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11618	Q9Y3E5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000393038.2	PTRH2-001	901	179aa	ENSP00000376758.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11618	Q9Y3E5	NM_016077.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000579915.1	PTRH2-004	531	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000587935.1	PTRH2-005	409	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 901 bps, Translation length: 179 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y3E5

CCDS

This transcript is a member of the Human CCDS set: CCDS11618

Version

ENST00000393038.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000335784 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000393038.2 PTRH2-001

Summary