Transcript: ENST00000563898.1 UQCRC2-002

Description

ubiquinol-cytochrome c reductase core protein II [Source:HGNC Symbol;Acc:12586]

Gene Synonyms

MC3DN5, QCR2, UQCR2

Location

Chromosome 16: 21,964,708-21,994,657 forward strand.

About this transcript

This transcript has 12 exons, is annotated with 12 domains and features, is associated with 12413 variant alleles and maps to 414 oligo probes.

Gene

This transcript is a product of gene ENSG00000140740.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000268379.4	UQCRC2-001	2615	453aa	ENSP00000268379.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10601	P22695	NM_003366.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000561553.1	UQCRC2-003	1415	412aa	ENSP00000456232.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BRG4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000565331.1	UQCRC2-005	565	176aa	ENSP00000455088.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BP04	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000563898.1	UQCRC2-002	1406	336aa	ENSP00000456738.1	Nonsense mediated decay		H3BSJ9	-	-
ENST00000565464.1	UQCRC2-006	929	132aa	ENSP00000457662.1	Nonsense mediated decay		H3BUI9	-	-
ENST00000564095.1	UQCRC2-008	542	116aa	ENSP00000457600.1	Nonsense mediated decay		H3BUE4	-	-
ENST00000563711.1	UQCRC2-004	2008	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000561798.1	UQCRC2-010	699	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000567810.1	UQCRC2-009	582	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000567757.1	UQCRC2-007	538	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000567597.1	UQCRC2-011	312	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 1,406 bps, Translation length: 336 residues

Version

ENST00000563898.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000430031 (version 1)

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Transcript: ENST00000563898.1 UQCRC2-002

Summary