Transcript: ENST00000460382.1 FTO-002

Description

fat mass and obesity associated [Source:HGNC Symbol;Acc:24678]

Gene Synonyms

ALKBH9, KIAA1752, MGC5149

Location

Chromosome 16: 53,920,842-54,146,899 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 3 domains and features, is associated with 88651 variant alleles and maps to 192 oligo probes.

Gene

This transcript is a product of gene ENSG00000140718.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000471389.1	FTO-001	11766	505aa	ENSP00000418823.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32448	B4DHN4 Q9C0B1	NM_001080432.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000463855.1	FTO-005	3056	127aa	ENSP00000417843.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9C0B1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000268349.7	FTO-008	2799	129aa	ENSP00000268349.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000460382.1	FTO-002	1517	106aa	ENSP00000417422.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9C0B1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394647.3	FTO-201	1065	209aa	ENSP00000378142.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DHN4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000431610.2	FTO-006	707	106aa	ENSP00000415636.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9C0B1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000464071.1	FTO-003	1065	70aa	ENSP00000418424.1	Nonsense mediated decay		F8WCB8	-	-
ENST00000472835.1	FTO-007	847	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000570395.1	FTO-009	555	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 1,517 bps, Translation length: 106 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9C0B1

Version

ENST00000460382.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000352197 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000460382.1 FTO-002

Summary