Transcript: ENST00000330498.3 SLC5A2-001

Description

solute carrier family 5 (sodium/glucose cotransporter), member 2 [Source:HGNC Symbol;Acc:11037]

Gene Synonyms

SGLT2

Location

Chromosome 16: 31,494,439-31,502,089 forward strand.

About this transcript

This transcript has 14 exons, is annotated with 25 domains and features, is associated with 4891 variant alleles and maps to 449 oligo probes.

Gene

This transcript is a product of gene ENSG00000140675.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000330498.3	SLC5A2-001	2271	672aa	ENSP00000327943.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10714	H3BP44 P31639	NM_003041.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000569576.1	SLC5A2-005	516	148aa	ENSP00000455143.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BP44	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000419665.2	SLC5A2-002	1852	458aa	ENSP00000410601.2	Nonsense mediated decay		A2RRD2 H3BP44	-	-
ENST00000564197.1	SLC5A2-008	498	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000567051.1	SLC5A2-009	334	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000568188.1	SLC5A2-003	2467	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000562006.1	SLC5A2-004	995	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000568891.1	SLC5A2-010	660	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000565446.1	SLC5A2-006	449	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 2,271 bps, Translation length: 672 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P31639

CCDS

This transcript is a member of the Human CCDS set: CCDS10714

Version

ENST00000330498.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000255627 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000330498.3 SLC5A2-001

Summary