Transcript: ENST00000345941.2 LPAR6-001

Description

lysophosphatidic acid receptor 6 [Source:HGNC Symbol;Acc:15520]

Gene Synonyms

ARWH1, LAH3, P2RY5, P2Y5

Location

Chromosome 13: 48,985,275-49,001,043 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 28 domains and features, is associated with 6360 variant alleles and maps to 394 oligo probes.

Gene

This transcript is a product of gene ENSG00000139679.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000378434.4	LPAR6-003	3004	344aa	ENSP00000367691.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9410	F2YGU4 P43657	NM_005767.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000345941.2	LPAR6-001	2428	344aa	ENSP00000344353.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9410	F2YGU4 P43657	NM_001162497.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000465365.2	LPAR6-004	805	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000482024.1	LPAR6-002	534	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000481832.1	LPAR6-007	479	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470937.1	LPAR6-005	442	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000464486.1	LPAR6-008	374	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000462781.1	LPAR6-006	356	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 1, Transcript length: 2,428 bps, Translation length: 344 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P43657

CCDS

This transcript is a member of the Human CCDS set: CCDS9410

Version

ENST00000345941.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000044873 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000345941.2 LPAR6-001

Summary