Transcript: ENST00000266712.6 TMTC3-001

Description

transmembrane and tetratricopeptide repeat containing 3 [Source:HGNC Symbol;Acc:26899]

Gene Synonyms

FLJ90492, SMILE

Location

About this transcript

This transcript has 14 exons, is annotated with 48 domains and features, is associated with 23589 variant alleles and maps to 654 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000266712.6	TMTC3-001	7203	914aa	ENSP00000266712.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9032	F8W044 Q6ZXV5	NM_181783.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000551088.1	TMTC3-003	646	145aa	ENSP00000448566.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VR71	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000549011.1	TMTC3-004	574	148aa	ENSP00000447640.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W044	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000547034.1	TMTC3-002	1842	406aa	ENSP00000448733.1	Nonsense mediated decay		F8VRY4 F8W044	-	-

Summary

Statistics

Exons: 14, Coding exons: 13, Transcript length: 7,203 bps, Translation length: 914 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6ZXV5

CCDS

This transcript is a member of the Human CCDS set: CCDS9032

Version

ENST00000266712.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000406421 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.