Transcript: ENST00000279488.7 DUSP6-001

Description

dual specificity phosphatase 6 [Source:HGNC Symbol;Acc:3072]

Gene Synonyms

HH19, MKP-3, MKP3, PYST1

Location

Chromosome 12: 89,741,009-89,747,048 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 21 domains and features, is associated with 3404 variant alleles and maps to 524 oligo probes.

Gene

This transcript is a product of gene ENSG00000139318.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000279488.7	DUSP6-001	4400	381aa	ENSP00000279488.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9033	F8VZA4 Q16828	NM_001946.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000308385.6	DUSP6-002	1959	235aa	ENSP00000307835.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9034	F8VZA4 Q16828	NM_022652.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000547291.1	DUSP6-005	1074	256aa	ENSP00000449838.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VW29	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000548755.1	DUSP6-003	567	117aa	ENSP00000446858.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VZA4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000547140.1	DUSP6-004	604	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 4,400 bps, Translation length: 381 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q16828

CCDS

This transcript is a member of the Human CCDS set: CCDS9033

Version

ENST00000279488.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000406534 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000279488.7 DUSP6-001

Summary