Transcript: ENST00000535726.1 NDUFA9-007

Description

NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa [Source:HGNC Symbol;Acc:7693]

Gene Synonyms

CC6, CI-39k, CI39k, NDUFS2L, SDR22E1

Location

Chromosome 12: 4,766,340-4,777,641 forward strand.

About this transcript

This transcript has 4 exons, is associated with 4705 variant alleles and maps to 103 oligo probes.

Gene

This transcript is a product of gene ENSG00000139180.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000266544.5	NDUFA9-001	3334	377aa	ENSP00000266544.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8532	Q16795 Q9BTT5	NM_005002.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540688.1	NDUFA9-008	642	136aa	ENSP00000439818.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H0J3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000535050.1	NDUFA9-006	512	149aa	ENSP00000440305.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GY40	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000542369.1	NDUFA9-005	548	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000396655.2	NDUFA9-002	1037	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000535726.1	NDUFA9-007	930	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000544675.1	NDUFA9-003	857	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000544679.1	NDUFA9-004	782	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000539573.1	NDUFA9-009	500	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 930 bps,

Version

ENST00000535726.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000398905 (version 1)

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Transcript: ENST00000535726.1 NDUFA9-007

Summary