Transcript: ENST00000507780.1 FGF5-005

Description

fibroblast growth factor 5 [Source:HGNC Symbol;Acc:3683]

Gene Synonyms

HBGF-5, Smag-82

Location

About this transcript

This transcript has 5 exons, is annotated with 10 domains and features, is associated with 31051 variant alleles and maps to 204 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000312465.7	FGF5-001	4555	268aa	ENSP00000311697.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34021	P12034 Q8NBG6 Q8NF90	NM_004464.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000456523.3	FGF5-002	5234	123aa	ENSP00000398353.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3586	P12034	NM_033143.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000507780.1	FGF5-005	658	119aa	ENSP00000423903.1	Nonsense mediated decay		H0Y9E2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000503413.1	FGF5-004	3042	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000380628.3	FGF5-003	390	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 658 bps, Translation length: 119 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000507780.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000362784 (version 1)