Transcript: ENST00000372955.3 FAM149B1-003

Description

family with sequence similarity 149, member B1 [Source:HGNC Symbol;Acc:29162]

Gene Synonyms

KIAA0974

Location

Chromosome 10: 74,937,630-74,995,210 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 6 domains and features, is associated with 21760 variant alleles and maps to 343 oligo probes.

Gene

This transcript is a product of gene ENSG00000138286.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000242505.6	FAM149B1-001	5408	582aa	ENSP00000242505.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44435	Q96BN6	NM_173348.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000445951.1	FAM149B1-002	2169	335aa	ENSP00000402293.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KN32 H0Y607	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000372955.3	FAM149B1-003	1534	469aa	ENSP00000362046.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000475829.1	FAM149B1-006	1044	209aa	ENSP00000476913.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000607940.1	FAM149B1-009	834	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470798.1	FAM149B1-007	491	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468462.1	FAM149B1-004	2520	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000466261.1	FAM149B1-005	696	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 1,534 bps, Translation length: 469 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000372955.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000145440 (version 1)

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Transcript: ENST00000372955.3 FAM149B1-003

Summary