Transcript: ENST00000471925.1 DNAJC13-002

Description

DnaJ (Hsp40) homolog, subfamily C, member 13 [Source:HGNC Symbol;Acc:30343]

Gene Synonyms

KIAA0678, RME8

Location

Chromosome 3: 132,175,138-132,177,193 forward strand.

About this transcript

This transcript has 4 exons, is associated with 903 variant alleles and maps to 126 oligo probes.

Gene

This transcript is a product of gene ENSG00000138246.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000260818.6	DNAJC13-001	7730	2243aa	ENSP00000260818.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33857	O75165	NM_015268.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000506813.1	DNAJC13-007	801	173aa	ENSP00000421735.1	Nonsense mediated decay		H0Y8Q2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000509279.1	DNAJC13-008	673	96aa	ENSP00000426240.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000486798.1	DNAJC13-003	2306	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000464766.1	DNAJC13-004	775	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000471925.1	DNAJC13-002	1439	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000463038.1	DNAJC13-005	546	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000513822.1	DNAJC13-006	338	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,439 bps,

Version

ENST00000471925.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000356808 (version 1)

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Transcript: ENST00000471925.1 DNAJC13-002

Summary