Transcript: ENST00000409962.1 ABCG5-004

Description

ATP-binding cassette, sub-family G (WHITE), member 5 [Source:HGNC Symbol;Acc:13886]

Gene Synonyms

STSL

Location

About this transcript

This transcript has 9 exons, is annotated with 5 domains and features, is associated with 13911 variant alleles and maps to 421 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000260645.1	ABCG5-001	2740	651aa	ENSP00000260645.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1814	Q2T9G2 Q53QN9 Q53T83 Q96QZ2 Q96QZ3 Q9H222	NM_022436.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543989.1	ABCG5-201	3033	256aa	ENSP00000445107.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q2T9G2 Q53T83	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000405322.1	ABCG5-002	2896	480aa	ENSP00000384513.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EX35 Q2T9G2 Q53T83	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000486512.1	ABCG5-003	3033	118aa	ENSP00000430935.1	Nonsense mediated decay		E5RHB7	-	-
ENST00000409962.1	ABCG5-004	2512	132aa	ENSP00000386501.1	Nonsense mediated decay		E5RFY8	-	-

Summary

Statistics

Exons: 9, Coding exons: 5, Transcript length: 2,512 bps, Translation length: 132 residues

Version

ENST00000409962.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000327844 (version 2)