Transcript: ENST00000404694.3 CGREF1-006

Description

cell growth regulator with EF-hand domain 1 [Source:HGNC Symbol;Acc:16962]

Gene Synonyms

CGR11

Location

Chromosome 2: 27,324,094-27,327,605 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 11 domains and features, is associated with 1948 variant alleles and maps to 323 oligo probes.

Gene

This transcript is a product of gene ENSG00000138028.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000402394.1	CGREF1-001	1902	318aa	ENSP00000385452.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33162	Q99674	NM_006569.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000312734.4	CGREF1-005	1610	318aa	ENSP00000324025.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33162	Q99674	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000402550.1	CGREF1-003	1575	132aa	ENSP00000385103.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54339	Q99674	NM_001166240.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000452318.2	CGREF1-202	1408	112aa	ENSP00000395042.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54338	Q99674	NM_001166241.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000404694.3	CGREF1-006	1376	440aa	ENSP00000385574.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q99674	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000405600.1	CGREF1-004	1346	318aa	ENSP00000386113.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33162	Q99674	NM_001166239.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000260595.5	CGREF1-201	1199	301aa	ENSP00000260595.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q99674	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000440612.1	CGREF1-002	1695	57aa	ENSP00000394306.1	Nonsense mediated decay		F8WE80	-	-
ENST00000467539.1	CGREF1-007	548	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,376 bps, Translation length: 440 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q99674

Version

ENST00000404694.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000324828 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000404694.3 CGREF1-006

Summary