Transcript: ENST00000529741.1 ARRB1-011

Description

arrestin, beta 1 [Source:HGNC Symbol;Acc:711]

Gene Synonyms

ARB1, ARR1

Location

Chromosome 11: 74,983,830-74,987,955 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 1833 variant alleles and maps to 96 oligo probes.

Gene

This transcript is a product of gene ENSG00000137486.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000420843.2	ARRB1-001	3336	418aa	ENSP00000409581.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44684	P49407	NM_004041.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000393505.4	ARRB1-201	2204	418aa	ENSP00000377141.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KPP7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000360025.3	ARRB1-002	1895	410aa	ENSP00000353124.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31640	P49407	NM_020251.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000532525.1	ARRB1-006	925	257aa	ENSP00000433171.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PM35	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000532447.1	ARRB1-012	701	195aa	ENSP00000436530.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000524400.1	ARRB1-004	593	69aa	ENSP00000434196.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000527385.1	ARRB1-007	563	72aa	ENSP00000433137.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000533609.1	ARRB1-005	559	59aa	ENSP00000436352.1	Nonsense mediated decay		H0YEQ2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000531012.1	ARRB1-003	1744	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000529280.1	ARRB1-009	684	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000533255.1	ARRB1-008	551	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000529741.1	ARRB1-011	404	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000530086.1	ARRB1-010	308	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 404 bps,

Version

ENST00000529741.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000384150 (version 1)

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Transcript: ENST00000529741.1 ARRB1-011

Summary