Transcript: ENST00000493018.1 RPL35-003

Description

ribosomal protein L35 [Source:HGNC Symbol;Acc:10344]

Gene Synonyms

L35

Location

About this transcript

This transcript has 5 exons, is annotated with 9 domains and features, is associated with 2149 variant alleles and maps to 382 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000348462.3	RPL35-001	455	123aa	ENSP00000259469.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6858	P42766	NM_007209.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000373570.4	RPL35-005	493	96aa	ENSP00000362671.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F2Z388	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000493018.1	RPL35-003	692	96aa	ENSP00000437215.1	Nonsense mediated decay		F2Z388	-	-
ENST00000487431.1	RPL35-004	785	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000495728.1	RPL35-002	649	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 692 bps, Translation length: 96 residues

Version

ENST00000493018.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000054037 (version 3)