Transcript: ENST00000374199.4 PRPF4-001

Description

pre-mRNA processing factor 4 [Source:HGNC Symbol;Acc:17349]

Gene Synonyms

HPRP4, HPRP4P, PRP4, Prp4p, SNRNP60

Location

About this transcript

This transcript has 14 exons, is annotated with 34 domains and features, is associated with 8237 variant alleles and maps to 680 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000374198.4	PRPF4-002	2787	522aa	ENSP00000363313.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6791	O43172	NM_004697.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000374199.4	PRPF4-001	3212	521aa	ENSP00000363315.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59142	O43172 Q59EL4 Q5T1M7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000488937.1	PRPF4-003	567	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 3,212 bps, Translation length: 521 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O43172

CCDS

This transcript is a member of the Human CCDS set: CCDS59142

Version

ENST00000374199.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000053707 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.