Transcript: ENST00000454368.2 KDELR2-002

Description

KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2 [Source:HGNC Symbol;Acc:6305]

Gene Synonyms

ELP-1, ERD2.2

Location

Chromosome 7: 6,501,393-6,510,037 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 4780 variant alleles and maps to 489 oligo probes.

Gene

This transcript is a product of gene ENSG00000136240.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000258739.4	KDELR2-001	2884	212aa	ENSP00000258739.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5351	P33947	NM_006854.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000490996.1	KDELR2-006	655	186aa	ENSP00000420501.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43550	P33947	NM_001100603.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000382267.3	KDELR2-004	583	38aa	ENSP00000371702.3	Nonsense mediated decay		H7BYF7	-	-
ENST00000463747.1	KDELR2-003	376	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000454368.2	KDELR2-002	2478	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000462052.1	KDELR2-005	382	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 2,478 bps,

Version

ENST00000454368.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000324384 (version 1)

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Transcript: ENST00000454368.2 KDELR2-002

Summary