Transcript: ENST00000548073.1 STAB2-004

Description

stabilin 2 [Source:HGNC Symbol;Acc:18629]

Gene Synonyms

DKFZP434E0321, FEEL-2, FEEL2, FELE-2, FELL, FELL2, FEX2, HARE, STAB-2

Location

Chromosome 12: 104,148,870-104,152,065 forward strand.

About this transcript

This transcript has 3 exons, is associated with 1636 variant alleles and maps to 84 oligo probes.

Gene

This transcript is a product of gene ENSG00000136011.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000388887.2	STAB2-001	8251	2551aa	ENSP00000373539.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31888	H0YIF3 Q8WWQ8	NM_017564.9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000552777.1	STAB2-006	499	135aa	ENSP00000446629.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YHA5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000549474.1	STAB2-002	310	33aa	ENSP00000449282.1	Nonsense mediated decay		H0YIF3	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000548073.1	STAB2-004	793	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000548579.1	STAB2-005	561	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000549798.1	STAB2-003	301	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 793 bps,

Version

ENST00000548073.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000407092 (version 1)

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Transcript: ENST00000548073.1 STAB2-004

Summary