Transcript: ENST00000489546.1 TSGA10-008

Description

testis specific, 10 [Source:HGNC Symbol;Acc:14927]

Gene Synonyms

CEP4L, CT79

Location

Chromosome 2: 99,634,663-99,695,391 reverse strand.

About this transcript

This transcript has 7 exons, is associated with 24107 variant alleles and maps to 240 oligo probes.

Gene

This transcript is a product of gene ENSG00000135951.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000393483.3	TSGA10-001	3878	698aa	ENSP00000377123.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2037	F8WA32 Q9BZW7	NM_025244.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000355053.4	TSGA10-002	3037	698aa	ENSP00000347161.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2037	F8WA32 Q9BZW7	NM_182911.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000410001.1	TSGA10-007	3036	698aa	ENSP00000386956.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2037	F8WA32 Q9BZW7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000539964.1	TSGA10-201	2485	698aa	ENSP00000444419.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2037	F8WA32 Q9BZW7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000393482.3	TSGA10-003	2460	690aa	ENSP00000377122.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8WA32	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000409564.2	TSGA10-005	2390	620aa	ENSP00000386508.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B8ZZZ9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000542655.1	TSGA10-202	1502	297aa	ENSP00000445623.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z925	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000478090.1	TSGA10-006	1756	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489546.1	TSGA10-008	1201	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000488960.1	TSGA10-015	842	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000476849.1	TSGA10-009	736	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000471174.1	TSGA10-010	595	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489926.2	TSGA10-014	588	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000497915.1	TSGA10-013	580	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000494483.1	TSGA10-011	559	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000498097.1	TSGA10-017	431	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489348.1	TSGA10-019	390	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000465216.1	TSGA10-016	283	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000483914.1	TSGA10-018	255	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000464459.1	TSGA10-004	2492	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000462782.1	TSGA10-012	561	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 0, Transcript length: 1,201 bps,

Version

ENST00000489546.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000329921 (version 1)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000489546.1 TSGA10-008

Summary