Transcript: ENST00000367607.3 CEP350-001

Description

centrosomal protein 350kDa [Source:HGNC Symbol;Acc:24238]

Gene Synonyms

CAP350, GM133, KIAA0480

Location

Chromosome 1: 179,923,873-180,084,015 forward strand.

About this transcript

This transcript has 38 exons, is annotated with 37 domains and features, is associated with 65740 variant alleles and maps to 1429 oligo probes.

Gene

This transcript is a product of gene ENSG00000135837.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000367607.3	CEP350-001	13491	3117aa	ENSP00000356579.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1336	Q5T2X4 Q5VT06	NM_014810.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000429851.1	CEP350-007	6096	1292aa	ENSP00000412460.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T2X4	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000417046.1	CEP350-005	2724	581aa	ENSP00000401608.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T2X4	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000491495.2	CEP350-012	1059	242aa	ENSP00000435808.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PIK0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000418229.1	CEP350-008	992	331aa	ENSP00000407044.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000437245.1	CEP350-004	408	110aa	ENSP00000409395.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T2X5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000357434.2	CEP350-011	392	130aa	ENSP00000350016.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2A4F6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000490047.1	CEP350-009	434	57aa	ENSP00000432910.1	Nonsense mediated decay		H0YD38	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000490141.1	CEP350-002	3549	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000496440.1	CEP350-006	765	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484356.1	CEP350-003	524	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 38, Coding exons: 37, Transcript length: 13,491 bps, Translation length: 3,117 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5VT06

CCDS

This transcript is a member of the Human CCDS set: CCDS1336

Version

ENST00000367607.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000085315 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000367607.3 CEP350-001

Summary