Transcript: ENST00000549129.1 AGAP2-005

Description

ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:16921]

Gene Synonyms

CENTG1, GGAP2, KIAA0167, PIKE, RP11-571M6.8

Location

About this transcript

This transcript has 5 exons, is annotated with 5 domains and features, is associated with 714 variant alleles and maps to 105 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000547588.1	AGAP2-002	3579	1192aa	ENSP00000449241.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44932	B3KVD5 F8VVT9	NM_001122772.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000328568.5	AGAP2-003	4464	1036aa	ENSP00000328160.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000257897.3	AGAP2-001	3938	836aa	ENSP00000257897.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8951	Q99490	NM_014770.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000549129.1	AGAP2-005	608	169aa	ENSP00000446683.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YHB1	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 608 bps, Translation length: 169 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000549129.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000408774 (version 1)