Transcript: ENST00000257724.3 MDFIC-007

Description

MyoD family inhibitor domain containing [Source:HGNC Symbol;Acc:28870]

Gene Synonyms

HIC

Location

Chromosome 7: 114,562,209-114,659,256 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 7 domains and features, is associated with 40944 variant alleles and maps to 449 oligo probes.

Gene

This transcript is a product of gene ENSG00000135272.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000257724.3	MDFIC-007	4598	355aa	ENSP00000257724.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34737	C9J784 J3KN13	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000393486.1	MDFIC-001	4598	246aa	ENSP00000377126.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55155	C9J784 Q9P1T7	NM_199072.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000427207.1	MDFIC-004	647	156aa	ENSP00000392098.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7BZY3	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000498196.1	MDFIC-006	584	135aa	ENSP00000418337.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J784	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000448022.1	MDFIC-003	484	43aa	ENSP00000412153.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J104	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000423503.1	MDFIC-002	474	43aa	ENSP00000401623.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J104	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000431629.1	MDFIC-005	808	156aa	ENSP00000416668.1	Nonsense mediated decay		H7C4B9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 4,598 bps, Translation length: 355 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS34737

Version

ENST00000257724.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000366397 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000257724.3 MDFIC-007

Summary