Transcript: ENST00000373477.4 YARS-001

Description

tyrosyl-tRNA synthetase [Source:HGNC Symbol;Acc:12840]

Gene Synonyms

CMTDIC, TYRRS, YRS, YTS, tyrRS

Location

Chromosome 1: 33,240,840-33,283,754 reverse strand.

About this transcript

This transcript has 13 exons, is annotated with 17 domains and features, is associated with 19964 variant alleles and maps to 563 oligo probes.

Gene

This transcript is a product of gene ENSG00000134684.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000373477.4	YARS-001	3238	528aa	ENSP00000362576.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS368	P54577	NM_003680.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000469100.1	YARS-003	2245	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000487404.1	YARS-002	2197	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000490826.1	YARS-004	2178	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000478828.1	YARS-005	1044	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000481895.1	YARS-007	1018	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470377.1	YARS-006	782	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472692.1	YARS-009	773	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000466052.1	YARS-008	728	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 3,238 bps, Translation length: 528 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P54577

CCDS

This transcript is a member of the Human CCDS set: CCDS368

Version

ENST00000373477.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000011225 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000373477.4 YARS-001

Summary