Transcript: ENST00000560386.1 DPH6-003

Description

diphthamine biosynthesis 6 [Source:HGNC Symbol;Acc:30543]

Gene Synonyms

ATPBD4, MGC14798

Location

Chromosome 15: 35,509,546-35,703,052 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 79381 variant alleles and maps to 152 oligo probes.

Gene

This transcript is a product of gene ENSG00000134146.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000256538.4	DPH6-001	2099	267aa	ENSP00000256538.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10043	H0YND7 Q7L8W6	NM_080650.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000440392.2	DPH6-002	2369	165aa	ENSP00000406976.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45213	Q7L8W6	NM_001141972.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000561411.1	DPH6-004	581	169aa	ENSP00000453967.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YND7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000558266.1	DPH6-009	465	155aa	ENSP00000454015.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YNH5	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000560386.1	DPH6-003	3438	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000559585.1	DPH6-007	553	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000559784.1	DPH6-006	491	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000558973.1	DPH6-008	484	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000560526.1	DPH6-005	556	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 3,438 bps,

Version

ENST00000560386.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000417824 (version 1)

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Transcript: ENST00000560386.1 DPH6-003

Summary