Transcript: ENST00000535989.1 IPO8-009

Description

importin 8 [Source:HGNC Symbol;Acc:9853]

Gene Synonyms

IMP8, RANBP8

Location

Chromosome 12: 30,833,416-30,841,690 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 6 domains and features, is associated with 3064 variant alleles and maps to 63 oligo probes.

Gene

This transcript is a product of gene ENSG00000133704.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000256079.4	IPO8-001	5325	1037aa	ENSP00000256079.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8719	F5GXT5 F5H009 O15397	NM_006390.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000544829.1	IPO8-002	3212	832aa	ENSP00000444520.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53773	O15397	NM_001190995.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000535598.1	IPO8-010	758	167aa	ENSP00000446232.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000543446.1	IPO8-007	544	84aa	ENSP00000439413.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H009 F5H292	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000535989.1	IPO8-009	537	151aa	ENSP00000440979.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GXT5 F5H009	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000542464.1	IPO8-003	535	167aa	ENSP00000439556.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H244	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000358724.4	IPO8-006	526	33aa	ENSP00000444050.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H009	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000545077.1	IPO8-004	239	46aa	ENSP00000446254.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H2I3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000540979.1	IPO8-008	792	35aa	ENSP00000443789.1	Nonsense mediated decay		F5H815	-	-
ENST00000538338.1	IPO8-005	536	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 537 bps, Translation length: 151 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000535989.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000402772 (version 1)

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Transcript: ENST00000535989.1 IPO8-009

Summary