Transcript: ENST00000253789.5 PSMC3IP-001

Description

PSMC3 interacting protein [Source:HGNC Symbol;Acc:17928]

Gene Synonyms

GT198, HOP2, HUMGT198A, ODG3, TBPIP

Location

Chromosome 17: 40,724,341-40,729,849 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 5 domains and features, is associated with 3022 variant alleles and maps to 447 oligo probes.

Gene

This transcript is a product of gene ENSG00000131470.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000393795.3	PSMC3IP-002	1416	217aa	ENSP00000377384.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45688	K7ERB6 Q9P2W1	NM_016556.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000253789.5	PSMC3IP-001	1408	205aa	ENSP00000253789.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11431	Q9P2W1	NM_013290.6	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000587209.1	PSMC3IP-007	1381	154aa	ENSP00000468188.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59289	K7ERB6	NM_001256014.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000590760.1	PSMC3IP-008	664	92aa	ENSP00000466381.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9P2W1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000590931.1	PSMC3IP-005	1049	116aa	ENSP00000467952.1	Nonsense mediated decay		K7EQS1	-	-
ENST00000588544.1	PSMC3IP-004	902	85aa	ENSP00000465409.1	Nonsense mediated decay		K7EK12	-	-
ENST00000586337.1	PSMC3IP-011	747	84aa	ENSP00000466031.1	Nonsense mediated decay		K7ELD8	-	-
ENST00000589505.1	PSMC3IP-003	1244	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000587268.1	PSMC3IP-010	838	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 1,408 bps, Translation length: 205 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9P2W1

CCDS

This transcript is a member of the Human CCDS set: CCDS11431

Version

ENST00000253789.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000450428 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000253789.5 PSMC3IP-001

Summary