Transcript: ENST00000589613.1 TUBG1-002

Description

tubulin, gamma 1 [Source:HGNC Symbol;Acc:12417]

Gene Synonyms

CDCBM4, GCP-1, TUBG, TUBGCP1

Location

About this transcript

This transcript has 2 exons, is associated with 700 variant alleles and maps to 100 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000251413.3	TUBG1-001	1611	451aa	ENSP00000251413.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11433	P23258	NM_001070.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000591509.1	TUBG1-004	847	265aa	ENSP00000464867.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EIS0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000589688.1	TUBG1-005	1505	135aa	ENSP00000465582.1	Nonsense mediated decay		K7EKE5	-	-
ENST00000589613.1	TUBG1-002	916	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000588056.1	TUBG1-003	574	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 916 bps,

Version

ENST00000589613.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000450549 (version 1)