Transcript: ENST00000336169.3 RGN-002

Description

regucalcin [Source:HGNC Symbol;Acc:9989]

Gene Synonyms

GNL, HEL-S-41, RC, SMP30

Location

Chromosome X: 46,940,258-46,952,709 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 15 domains and features, is associated with 5343 variant alleles and maps to 370 oligo probes.

Gene

This transcript is a product of gene ENSG00000130988.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000397180.1	RGN-201	2235	299aa	ENSP00000380365.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14272	Q15493	NM_152869.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000457380.1	RGN-202	2019	227aa	ENSP00000406568.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q15493	NM_001282849.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000352078.4	RGN-001	1611	299aa	ENSP00000253303.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14272	Q15493	NM_004683.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000336169.3	RGN-002	1356	299aa	ENSP00000338400.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14272	Q15493	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000469346.1	RGN-004	1820	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000475448.1	RGN-003	630	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 1,356 bps, Translation length: 299 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q15493

CCDS

This transcript is a member of the Human CCDS set: CCDS14272

Version

ENST00000336169.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000056386 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000336169.3 RGN-002

Summary