Transcript: ENST00000480645.1 PLXNA3-006

Description

plexin A3 [Source:HGNC Symbol;Acc:9101]

Gene Synonyms

6.3, HSSEXGENE, PLXN3, PLXN4, Plxn3, SEX, XAP-6

Location

Chromosome X: 153,696,960-153,697,212 forward strand.

About this transcript

This transcript has 2 exons, is associated with 103 variant alleles and maps to 138 oligo probes.

Gene

This transcript is a product of gene ENSG00000130827.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000369682.3	PLXNA3-001	6752	1871aa	ENSP00000358696.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14752	P51805	NM_017514.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000493546.1	PLXNA3-007	793	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000495040.1	PLXNA3-008	421	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467463.1	PLXNA3-005	384	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480645.1	PLXNA3-006	160	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000497802.1	PLXNA3-002	729	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000491066.1	PLXNA3-003	604	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000478236.1	PLXNA3-004	460	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000482598.1	PLXNA3-009	280	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 160 bps,

Version

ENST00000480645.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000127848 (version 1)

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Transcript: ENST00000480645.1 PLXNA3-006

Summary