Transcript: ENST00000592434.1 TOMM40-002

Description

translocase of outer mitochondrial membrane 40 homolog (yeast) [Source:HGNC Symbol;Acc:18001]

Gene Synonyms

C19orf1, D19S1177E, PER-EC1, PEREC1, TOM40

Location

Chromosome 19: 45,394,488-45,406,943 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 6 domains and features, is associated with 6498 variant alleles and maps to 576 oligo probes.

Gene

This transcript is a product of gene ENSG00000130204.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000426677.2	TOMM40-003	1725	361aa	ENSP00000410339.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12646	K7EJ57 K7EKG6 O96008	NM_001128917.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000592434.1	TOMM40-002	3415	329aa	ENSP00000466084.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EJ57 K7EKG6 O96008	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000252487.5	TOMM40-001	1707	361aa	ENSP00000252487.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12646	K7EJ57 K7EKG6 O96008	NM_006114.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000405636.2	TOMM40-201	1699	361aa	ENSP00000385184.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12646	K7EJ57 K7EKG6 O96008	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000589649.1	TOMM40-005	731	214aa	ENSP00000465032.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EJ57 K7EKG6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000589253.1	TOMM40-004	207	36aa	ENSP00000465611.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EKG6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000592041.1	TOMM40-006	707	168aa	ENSP00000465608.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 3,415 bps, Translation length: 329 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O96008

Version

ENST00000592434.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000453240 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000592434.1 TOMM40-002

Summary