Transcript: ENST00000515047.1 EPB41L4A-003

Description

erythrocyte membrane protein band 4.1 like 4A [Source:HGNC Symbol;Acc:13278]

Gene Synonyms

EPB41L4, NBL4

Location

Chromosome 5: 111,505,706-111,541,199 reverse strand.

About this transcript

This transcript has 7 exons, is associated with 16703 variant alleles and maps to 221 oligo probes.

Gene

This transcript is a product of gene ENSG00000129595.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000261486.5	EPB41L4A-001	4707	686aa	ENSP00000261486.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43350	Q8NEH8 Q9HCS5	NM_022140.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000507810.1	EPB41L4A-007	2552	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000512395.1	EPB41L4A-005	546	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000509342.2	EPB41L4A-004	498	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000511790.1	EPB41L4A-011	356	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000513333.1	EPB41L4A-009	333	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000305368.4	EPB41L4A-002	2316	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000515047.1	EPB41L4A-003	851	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000511405.1	EPB41L4A-010	563	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000514203.1	EPB41L4A-006	235	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 0, Transcript length: 851 bps,

Version

ENST00000515047.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000370971 (version 1)

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Transcript: ENST00000515047.1 EPB41L4A-003

Summary