Transcript: ENST00000550114.1 EGLN3-010

Description

egl-9 family hypoxia-inducible factor 3 [Source:HGNC Symbol;Acc:14661]

Gene Synonyms

HIFP4H3, HIFPH3, PHD3

Location

Chromosome 14: 34,454,359-34,487,861 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 14053 variant alleles and maps to 32 oligo probes.

Gene

This transcript is a product of gene ENSG00000129521.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000250457.3	EGLN3-001	2709	239aa	ENSP00000250457.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9646	A6XP73 Q3T1B0 Q9H6Z9	NM_022073.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000547327.2	EGLN3-005	2849	148aa	ENSP00000446572.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VR39	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000553215.1	EGLN3-004	1004	145aa	ENSP00000447470.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W1G2 Q3T1B0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000487915.2	EGLN3-006	848	79aa	ENSP00000451316.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V3M1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000557521.1	EGLN3-012	658	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000546681.1	EGLN3-009	581	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000551935.1	EGLN3-011	575	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000550114.1	EGLN3-010	566	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000548285.1	EGLN3-002	535	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000464521.2	EGLN3-003	352	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000556785.1	EGLN3-013	864	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 566 bps,

Version

ENST00000550114.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000409591 (version 1)

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Transcript: ENST00000550114.1 EGLN3-010

Summary