Transcript: ENST00000574752.1 METTL16-005

Description

methyltransferase like 16 [Source:HGNC Symbol;Acc:28484]

Gene Synonyms

METT10D, MGC3329

Location

Chromosome 17: 2,323,479-2,415,129 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 7 domains and features, is associated with 44531 variant alleles and maps to 412 oligo probes.

Gene

This transcript is a product of gene ENSG00000127804.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000263092.6	METTL16-001	5711	562aa	ENSP00000263092.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42232	B7Z3X7 Q86W50	NM_024086.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538844.1	METTL16-201	1944	344aa	ENSP00000443633.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z3X7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000576976.1	METTL16-008	578	149aa	ENSP00000461546.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L4V1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000576556.1	METTL16-004	1944	121aa	ENSP00000460775.1	Nonsense mediated decay		I3L3W3	-	-
ENST00000574752.1	METTL16-005	1602	168aa	ENSP00000460207.1	Nonsense mediated decay		I3L362	-	-
ENST00000571298.1	METTL16-007	624	101aa	ENSP00000465733.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000571669.2	METTL16-002	5606	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000571332.1	METTL16-010	2644	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000574623.1	METTL16-006	759	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000381977.3	METTL16-011	490	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000577148.1	METTL16-009	554	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 4, Transcript length: 1,602 bps, Translation length: 168 residues

Version

ENST00000574752.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000437655 (version 1)

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Transcript: ENST00000574752.1 METTL16-005

Summary