Description
bestrophin 3 [Source:HGNC Symbol;Acc:17105]
Gene Synonyms
MGC13168, MGC40411, VMD2L3
Location
Chromosome 12: 70,078,333-70,093,141 reverse strand.
About this transcript
This transcript has 5 exons, is annotated with 3 domains and features, is associated with 6003 variant alleles and maps to 288 oligo probes.
Gene
This transcript is a product of gene ENSG00000127325.14 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000330891.5 | BEST3-001 | 3532 | 668aa | ENSP00000332413.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8992 | F8VVZ2 Q8N1M1 | NM_032735.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000553096.1 | BEST3-009 | 2929 | 562aa | ENSP00000449548.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS61192 | F8VVZ2 | NM_001282613.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000488961.1 | BEST3-002 | 2878 | 455aa | ENSP00000433213.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS41810 | Q8N1M1 | NM_152439.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000266661.4 | BEST3-004 | 1876 | 72aa | ENSP00000266661.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q8N1M1 | NM_001282615.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000476098.1 | BEST3-003 | 1692 | 197aa | ENSP00000434713.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PNM2 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000331471.4 | BEST3-008 | 1506 | 398aa | ENSP00000329064.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS61193 | Q8N1M1 | NM_001282614.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000551160.1 | BEST3-010 | 721 | 72aa | ENSP00000449377.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q8N1M1 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000552295.1 | BEST3-013 | 720 | 161aa | ENSP00000447689.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VZR0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000393365.1 | BEST3-201 | 709 | 72aa | ENSP00000377032.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q8N1M1 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000548658.1 | BEST3-012 | 572 | 142aa | ENSP00000446575.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VR37 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000547208.1 | BEST3-011 | 1187 | 143aa | ENSP00000449868.1 | Nonsense mediated decay | F8VVX2 | - | - | |
| ENST00000533674.1 | BEST3-006 | 670 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000529843.1 | BEST3-007 | 386 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - |