Transcript: ENST00000397143.2 WDR60-004

Description

WD repeat domain 60 [Source:HGNC Symbol;Acc:21862]

Gene Synonyms

FAP163, FLJ10300, SRPS6

Location

About this transcript

This transcript has 3 exons, is annotated with 6 domains and features, is associated with 1064 variant alleles and maps to 76 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000407559.3	WDR60-001	3769	1066aa	ENSP00000384290.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47757	A4D230 H7C1E8 Q8WVS4	NM_018051.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397143.2	WDR60-004	457	152aa	ENSP00000380330.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7BYQ2	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000444851.1	WDR60-002	2769	522aa	ENSP00000392608.1	Nonsense mediated decay		H7C022	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000454771.1	WDR60-005	812	196aa	ENSP00000399971.1	Nonsense mediated decay		H7C1E8	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000467220.1	WDR60-003	5410	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 457 bps, Translation length: 152 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENST00000397143.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000322671 (version 1)