Transcript: ENST00000541016.1 EMG1-006

Description

EMG1 N1-specific pseudouridine methyltransferase [Source:HGNC Symbol;Acc:16912]

Gene Synonyms

C2F, Grcc2f, NEP1

Location

Chromosome 12: 7,080,123-7,084,541 forward strand.

About this transcript

This transcript has 5 exons, is associated with 2233 variant alleles and maps to 420 oligo probes.

Gene

This transcript is a product of gene ENSG00000126749.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq	Flags
ENST00000261406.6	EMG1-201	1069	243aa	ENSP00000476966.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	NM_006331.7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000546220.1	EMG1-001	1575	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENST00000564245.1	EMG1-007	1086	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENST00000539535.2	EMG1-009	957	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENST00000607161.1	EMG1-008	765	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENST00000541016.1	EMG1-006	647	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENST00000539196.1	EMG1-005	616	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENST00000539440.1	EMG1-002	1222	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENST00000451846.2	EMG1-004	719	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 647 bps,

Version

ENST00000541016.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000401808 (version 1)

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Transcript: ENST00000541016.1 EMG1-006

Summary