Transcript: ENST00000474384.1 SNRPB-003

Description

small nuclear ribonucleoprotein polypeptides B and B1 [Source:HGNC Symbol;Acc:11153]

Gene Synonyms

COD, SNRPB1, Sm-B/B', SmB/B', SmB/SmB', snRNP-B

Location

About this transcript

This transcript has 8 exons, is annotated with 6 domains and features, is associated with 4231 variant alleles and maps to 352 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000438552.2	SNRPB-002	1008	240aa	ENSP00000412566.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13026	P14678	NM_198216.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000339610.6	SNRPB-201	1450	155aa	ENSP00000342305.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8MT02	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000381342.2	SNRPB-001	1154	231aa	ENSP00000370746.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13027	P14678 Q66K91	NM_003091.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000474384.1	SNRPB-003	985	70aa	ENSP00000474579.1	Nonsense mediated decay		S4R3P3	-	-

Summary

Statistics

Exons: 8, Coding exons: 3, Transcript length: 985 bps, Translation length: 70 residues

Version

ENST00000474384.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000077586 (version 4)