Transcript: ENST00000381342.2 SNRPB-001

Description

small nuclear ribonucleoprotein polypeptides B and B1 [Source:HGNC Symbol;Acc:11153]

Gene Synonyms

COD, SNRPB1, Sm-B/B', SmB/B', SmB/SmB', snRNP-B

Location

About this transcript

This transcript has 7 exons, is annotated with 10 domains and features, is associated with 4358 variant alleles and maps to 542 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000438552.2	SNRPB-002	1008	240aa	ENSP00000412566.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13026	P14678	NM_198216.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000339610.6	SNRPB-201	1450	155aa	ENSP00000342305.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8MT02	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000381342.2	SNRPB-001	1154	231aa	ENSP00000370746.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13027	P14678 Q66K91	NM_003091.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000474384.1	SNRPB-003	985	70aa	ENSP00000474579.1	Nonsense mediated decay		S4R3P3	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,154 bps, Translation length: 231 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P14678

CCDS

This transcript is a member of the Human CCDS set: CCDS13027

Version

ENST00000381342.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000077584 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.