Transcript: ENST00000432018.1 IL1B-007

Description

interleukin 1, beta [Source:HGNC Symbol;Acc:5992]

Gene Synonyms

IL-1, IL-1B, IL1-BETA, IL1F2

Location

Chromosome 2: 113,590,329-113,594,011 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 8 domains and features, is associated with 1514 variant alleles and maps to 169 oligo probes.

Gene

This transcript is a product of gene ENSG00000125538.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000263341.2	IL1B-001	1631	269aa	ENSP00000263341.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2102	B5BUQ8 C9JSC2 C9JVK0 C9JWV2 P01584	NM_000576.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000418817.1	IL1B-003	581	143aa	ENSP00000407219.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JSC2 C9JVK0 C9JWV2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000432018.1	IL1B-007	581	125aa	ENSP00000409680.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JSC2 C9JVK0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000416750.1	IL1B-006	580	111aa	ENSP00000400854.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JVK0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000491056.1	IL1B-002	1617	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000496280.1	IL1B-005	849	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000487639.1	IL1B-008	654	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000477398.1	IL1B-004	571	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 581 bps, Translation length: 125 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000432018.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000330722 (version 1)

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Transcript: ENST00000432018.1 IL1B-007

Summary