Transcript: ENST00000478840.1 UPF3B-003

Description

UPF3 regulator of nonsense transcripts homolog B (yeast) [Source:HGNC Symbol;Acc:20439]

Gene Synonyms

HUPF3B, MRXS14, RENT3B, UPF3X

Location

About this transcript

This transcript has 6 exons, is associated with 2209 variant alleles and maps to 202 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000276201.2	UPF3B-001	2378	483aa	ENSP00000276201.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14588	I3XIE4 Q9BZI7	NM_080632.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000345865.2	UPF3B-002	2335	470aa	ENSP00000245418.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14587	I3XIE4 Q9BZI7	NM_023010.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000478840.1	UPF3B-003	748	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 748 bps,

Version

ENST00000478840.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000058070 (version 1)